STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpA_2Penicillin-binding protein A. (532 aa)    
Predicted Functional Partners:
ftsW_1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.998
ftsW_2
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.973
mrdB
Rod shape-determining protein RodA; Belongs to the SEDS family.
 
 0.966
CUO43622.1
Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
 
   
 0.881
ftsW_3
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.866
yhbU_1
Uncharacterized protease yhbU precursor.
       0.820
CUO86686.1
Uncharacterised protein.
 
 
 0.807
CUO32641.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.789
mrcA
Penicillin-binding protein 1A.
 
 
 
 0.774
ruvB
Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.769
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.