rng protein (Anaerobutyricum hallii) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

rng

Ribonuclease G. (403 aa)

Predicted Functional Partners:

pnp

0.986

yvcJ

0.936

cshA

0.936

eno_1

0.858

eno_2

0.858

CUO07818.1

0.768

CUP04287.1

0.751

rsmB

0.702

rplU

0.615

CUO45016.1

0.614

Your Current Organism:

Anaerobutyricum hallii

NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUO07818.1	CUP04287.1	ERS852450_01108	ERS852450_02932	Predicted RNA-binding protein (contains KH domain).	Predicted RNA-binding protein (contains KH domain); Belongs to the UPF0109 family.	0.993
CUO07818.1	rng	ERS852450_01108	ERS852450_01832	Predicted RNA-binding protein (contains KH domain).	Ribonuclease G.	0.768
CUO45016.1	rng	ERS852450_01829	ERS852450_01832	Radical SAM family uncharacterized protein.	Ribonuclease G.	0.614
CUO45016.1	rplU	ERS852450_01829	ERS852450_01833	Radical SAM family uncharacterized protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.428
CUP04287.1	CUO07818.1	ERS852450_02932	ERS852450_01108	Predicted RNA-binding protein (contains KH domain); Belongs to the UPF0109 family.	Predicted RNA-binding protein (contains KH domain).	0.993
CUP04287.1	rng	ERS852450_02932	ERS852450_01832	Predicted RNA-binding protein (contains KH domain); Belongs to the UPF0109 family.	Ribonuclease G.	0.751
CUP04287.1	rplU	ERS852450_02932	ERS852450_01833	Predicted RNA-binding protein (contains KH domain); Belongs to the UPF0109 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.501
cshA	eno_1	ERS852450_01424	ERS852450_01254	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	0.525
cshA	eno_2	ERS852450_01424	ERS852450_02898	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	0.525
cshA	pnp	ERS852450_01424	ERS852450_00051	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.981
cshA	rng	ERS852450_01424	ERS852450_01832	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	Ribonuclease G.	0.936
cshA	rplU	ERS852450_01424	ERS852450_01833	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.926
cshA	rsmB	ERS852450_01424	ERS852450_02555	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.719
eno_1	cshA	ERS852450_01254	ERS852450_01424	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	0.525
eno_1	pnp	ERS852450_01254	ERS852450_00051	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.648
eno_1	rng	ERS852450_01254	ERS852450_01832	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	Ribonuclease G.	0.858
eno_2	cshA	ERS852450_02898	ERS852450_01424	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	0.525
eno_2	pnp	ERS852450_02898	ERS852450_00051	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.648
eno_2	rng	ERS852450_02898	ERS852450_01832	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	Ribonuclease G.	0.858
pnp	cshA	ERS852450_00051	ERS852450_01424	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.	0.981