STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO56059.1CHAP domain. (778 aa)    
Predicted Functional Partners:
CUO56101.1
Conjugal transfer ATPase TrbE.
 
    0.928
CUO56464.1
Uncharacterised protein.
 
     0.839
CUN71859.1
RNase PH-related exoribonuclease.
  
     0.771
CUO54824.1
ParB-like nuclease domain.
  
     0.769
CUO12692.1
Uncharacterised protein.
  
     0.765
CUN52282.1
Uncharacterized protein conserved in bacteria.
  
     0.763
CUP03319.1
Uncharacterised protein.
  
     0.763
CUO57716.1
ParB-like nuclease domain.
  
     0.762
CUO63798.1
Uncharacterised protein.
  
     0.748
CUO98017.1
Protein kinase domain.
  
    0.741
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.