STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO81469.1Nucleoside triphosphatase YtkD. (251 aa)    
Predicted Functional Partners:
CUO03146.1
Uncharacterised protein.
 
     0.570
CUO81533.1
Relaxase/Mobilisation nuclease domain.
 
    0.556
CUO81592.1
Oxidative stress defense protein.
 
     0.496
mutX
8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family.
  
     0.488
CUO03193.1
Uncharacterised protein.
  
     0.482
CUO81365.1
Antitoxin HipB.
  
    0.474
CUO79913.1
Domain of uncharacterised function (DUF955).
  
    0.456
CUO81401.1
Domain of uncharacterised function (DUF955).
  
    0.454
CUO79869.1
Anaerobic benzoate catabolism transcriptional regulator.
  
    0.449
CUN93280.1
Uncharacterised protein.
  
     0.442
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.