STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO81496.1Bacterial mobilisation protein (MobC). (107 aa)    
Predicted Functional Partners:
CUO81533.1
Relaxase/Mobilisation nuclease domain.
    0.948
CUO80015.1
Relaxase/Mobilisation nuclease domain.
    0.781
CUN93633.1
Uncharacterised protein.
 
     0.774
traG_2
Conjugal transfer protein traG.
 
     0.774
CUN94833.1
Protein of uncharacterised function (DUF3801).
 
     0.773
CUN93574.1
Type IV secretory pathway%2C VirB4 components.
 
     0.767
CUO55655.1
Uncharacterised protein.
 
   
 0.762
CUN93437.1
Uncharacterised protein.
 
     0.754
iap
Probable endopeptidase p60 precursor.
 
     0.747
CUN93196.1
DNA methylase.
 
     0.733
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.