STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO83072.1Lipid A core-O-antigen ligase and related enzymes. (395 aa)    
Predicted Functional Partners:
wcaJ_4
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
  
  
 0.967
kfoC_5
Chondroitin polymerase.
  
  
 0.799
CUO83213.1
Glycogen synthase.
  
  
 0.724
CUO82959.1
Polysaccharide biosynthesis protein.
  
  
 0.716
CUO83002.1
Polysaccharide pyruvyl transferase.
       0.632
CUO83105.1
Molybdenum cofactor biosynthesis protein A.
       0.631
ugd_2
UDP-glucose 6-dehydrogenase.
  
  
 0.606
glgA_3
Capsular glucan synthase.
  
  
 0.575
wcaJ_1
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
  
  
 0.552
CUO82925.1
Uncharacterised protein.
  
    0.536
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.