STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO89383.1DUF218 domain. (213 aa)    
Predicted Functional Partners:
yihY
YihY family inner membrane protein; Belongs to the UPF0761 family.
       0.773
CUP10335.1
Efflux transporter%2C RND family%2C MFP subunit.
 
     0.554
CUP10409.1
Putative efflux pump membrane fusion protein.
  
     0.534
dhaS_2
HTH-type dhaKLM operon transcriptional activator dhaS.
  
     0.511
cgkA_4
Kappa-carrageenase precursor.
  
    0.488
CUN96322.1
Uncharacterised protein.
 
     0.478
CUO30250.1
Uncharacterized protein involved in cytokinesis%2C contains TGc (transglutaminase/protease-like) domain.
  
     0.459
CUP03319.1
Uncharacterised protein.
  
     0.442
CUO28239.1
Spore coat assembly protein SafA.
  
     0.427
CUO51661.1
Maltose-binding periplasmic proteins/domains.
  
    0.408
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.