soxS protein (Anaerobutyricum hallii) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

soxS

Regulatory protein soxS. (642 aa)

Predicted Functional Partners:

rpoA

0.999

rpoB

0.961

rpoC

0.941

rpoZ

0.941

CUN49570.1

0.707

sigA_1

0.707

sigF_1

0.707

sigA_2

0.707

sigA_3

0.707

rob

0.592

Your Current Organism:

Anaerobutyricum hallii

NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUN49570.1	rob	ERS852450_00091	ERS852450_02736	RNA polymerase sigma factor%2C sigma-70 family.	Right origin-binding protein.	0.707
CUN49570.1	rpoA	ERS852450_00091	ERS852450_02850	RNA polymerase sigma factor%2C sigma-70 family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.773
CUN49570.1	rpoB	ERS852450_00091	ERS852450_00679	RNA polymerase sigma factor%2C sigma-70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.800
CUN49570.1	rpoC	ERS852450_00091	ERS852450_00678	RNA polymerase sigma factor%2C sigma-70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.784
CUN49570.1	rpoZ	ERS852450_00091	ERS852450_02549	RNA polymerase sigma factor%2C sigma-70 family.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.768
CUN49570.1	soxS	ERS852450_00091	ERS852450_02735	RNA polymerase sigma factor%2C sigma-70 family.	Regulatory protein soxS.	0.707
rob	CUN49570.1	ERS852450_02736	ERS852450_00091	Right origin-binding protein.	RNA polymerase sigma factor%2C sigma-70 family.	0.707
rob	rpoA	ERS852450_02736	ERS852450_02850	Right origin-binding protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rob	rpoB	ERS852450_02736	ERS852450_00679	Right origin-binding protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.961
rob	rpoC	ERS852450_02736	ERS852450_00678	Right origin-binding protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.941
rob	rpoZ	ERS852450_02736	ERS852450_02549	Right origin-binding protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.941
rob	sigA_1	ERS852450_02736	ERS852450_00478	Right origin-binding protein.	Sigma-A; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.707
rob	sigA_2	ERS852450_02736	ERS852450_02914	Right origin-binding protein.	Sigma-A; Belongs to the sigma-70 factor family.	0.707
rob	sigA_3	ERS852450_02736	ERS852450_02916	Right origin-binding protein.	Sigma-A; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.707
rob	sigF_1	ERS852450_02736	ERS852450_00917	Right origin-binding protein.	Stage II sporulation protein AC; Belongs to the sigma-70 factor family.	0.707
rob	soxS	ERS852450_02736	ERS852450_02735	Right origin-binding protein.	Regulatory protein soxS.	0.592
rpoA	CUN49570.1	ERS852450_02850	ERS852450_00091	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor%2C sigma-70 family.	0.773
rpoA	rob	ERS852450_02850	ERS852450_02736	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Right origin-binding protein.	0.999
rpoA	rpoB	ERS852450_02850	ERS852450_00679	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	ERS852450_02850	ERS852450_00678	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999