STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhaDGlycerol dehydrogenase. (365 aa)    
Predicted Functional Partners:
fucO
Lactaldehyde reductase.
 
 
0.922
dhaK_1
PTS-dependent dihydroxyacetone kinase%2C dihydroxyacetone-binding subunit dhaK.
  
 
 0.916
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
     
 0.914
glpK_4
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
     
 0.913
dhaL_1
PTS-dependent dihydroxyacetone kinase%2C ADP-binding subunit dhaL.
  
 
 0.911
dhaB
Glycerol dehydratase large subunit.
    
 0.907
dhaM_1
PTS-dependent dihydroxyacetone kinase%2C phosphotransferase subunit dhaM.
    
 0.905
pduE
Propanediol dehydratase small subunit.
    
  0.902
pta_2
Phosphate acetyltransferase.
     
 0.446
ramA
(R)-stereoselective amidase.
     0.408
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.