STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP06551.1Phage terminase%2C large subunit%2C PBSX family. (436 aa)    
Predicted Functional Partners:
CUP06519.1
Phage portal protein%2C putative%2C A118 family.
 
    0.962
CUP06501.1
Phage minor capsid protein 2.
 
    0.949
CUP06585.1
Uncharacterized conserved protein.
     0.890
CUP06472.1
Uncharacterised protein.
       0.779
CUP06161.1
Bacteriophage Gp15 protein.
 
    0.715
CUP06437.1
Predicted ribosomal protein.
       0.602
CUN92959.1
RNA polymerase sigma factor SigB.
 
     0.489
CUP06376.1
Predicted phage phi-C31 gp36 major capsid-like protein.
  
    0.485
CUP06102.1
Uncharacterised protein.
  
    0.477
CUP06220.1
Uncharacterised protein.
       0.458
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.