Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP12820.1 | CUP13172.1 | ERS852450_03119 | ERS852450_03127 | Putative enoyl-[acyl-carrier-protein] reductase II. | Nitronate monooxygenase. | 0.633 |
CUP12820.1 | accB | ERS852450_03119 | ERS852450_03123 | Putative enoyl-[acyl-carrier-protein] reductase II. | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.481 |
CUP12820.1 | accC | ERS852450_03119 | ERS852450_03121 | Putative enoyl-[acyl-carrier-protein] reductase II. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.510 |
CUP12820.1 | accD | ERS852450_03119 | ERS852450_03120 | Putative enoyl-[acyl-carrier-protein] reductase II. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.781 |
CUP12820.1 | acpP_2 | ERS852450_03119 | ERS852450_03128 | Putative enoyl-[acyl-carrier-protein] reductase II. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.619 |
CUP12820.1 | fabD | ERS852450_03119 | ERS852450_03126 | Putative enoyl-[acyl-carrier-protein] reductase II. | Malonyl CoA-acyl carrier protein transacylase. | 0.692 |
CUP12820.1 | fabF | ERS852450_03119 | ERS852450_03124 | Putative enoyl-[acyl-carrier-protein] reductase II. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.728 |
CUP12820.1 | fabG_4 | ERS852450_03119 | ERS852450_03125 | Putative enoyl-[acyl-carrier-protein] reductase II. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.419 |
CUP12820.1 | fabH | ERS852450_03119 | ERS852450_03129 | Putative enoyl-[acyl-carrier-protein] reductase II. | 3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.561 |
CUP12820.1 | fabZ | ERS852450_03119 | ERS852450_03122 | Putative enoyl-[acyl-carrier-protein] reductase II. | (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.539 |
CUP13172.1 | CUP12820.1 | ERS852450_03127 | ERS852450_03119 | Nitronate monooxygenase. | Putative enoyl-[acyl-carrier-protein] reductase II. | 0.633 |
CUP13172.1 | accB | ERS852450_03127 | ERS852450_03123 | Nitronate monooxygenase. | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.832 |
CUP13172.1 | accC | ERS852450_03127 | ERS852450_03121 | Nitronate monooxygenase. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.589 |
CUP13172.1 | accD | ERS852450_03127 | ERS852450_03120 | Nitronate monooxygenase. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.730 |
CUP13172.1 | acpP_2 | ERS852450_03127 | ERS852450_03128 | Nitronate monooxygenase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.879 |
CUP13172.1 | fabD | ERS852450_03127 | ERS852450_03126 | Nitronate monooxygenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.940 |
CUP13172.1 | fabF | ERS852450_03127 | ERS852450_03124 | Nitronate monooxygenase. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.991 |
CUP13172.1 | fabG_4 | ERS852450_03127 | ERS852450_03125 | Nitronate monooxygenase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.819 |
CUP13172.1 | fabH | ERS852450_03127 | ERS852450_03129 | Nitronate monooxygenase. | 3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.754 |
CUP13172.1 | fabZ | ERS852450_03127 | ERS852450_03122 | Nitronate monooxygenase. | (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.976 |
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