STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP19041.1Uncharacterised protein. (396 aa)    
Predicted Functional Partners:
yqbO
Phage-related minor tail protein.
  
   0.751
CUN61022.1
Phage portal protein%2C HK97 family.
  
   0.749
CUN61245.1
Bacteriophage head-tail adaptor.
  
 
 0.741
aroA1
3-phosphoshikimate 1-carboxyvinyltransferase 1; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.610
CUN61792.1
Phage-related protein.
  
 
 0.577
CUP06065.1
Phage-related holin (Lysis protein).
  
 
 0.577
CUN61735.1
Uncharacterised protein.
  
   0.570
CUP06102.1
Uncharacterised protein.
  
   0.570
CUO94971.1
Uncharacterised protein.
   
 
 0.548
CUN61925.1
Phage-related holin (Lysis protein).
   
   0.543
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.