Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP19677.1 | deoR_2 | ERS852450_03242 | ERS852450_03243 | Uncharacterised protein. | Deoxyribonucleoside regulator. | 0.543 |
CUP19677.1 | gshAB | ERS852450_03242 | ERS852450_03241 | Uncharacterised protein. | Gamma-GCS-GS. | 0.773 |
deoR_2 | CUP19677.1 | ERS852450_03243 | ERS852450_03242 | Deoxyribonucleoside regulator. | Uncharacterised protein. | 0.543 |
deoR_2 | dhaK_1 | ERS852450_03243 | ERS852450_02770 | Deoxyribonucleoside regulator. | PTS-dependent dihydroxyacetone kinase%2C dihydroxyacetone-binding subunit dhaK. | 0.863 |
deoR_2 | dhaK_2 | ERS852450_03243 | ERS852450_03054 | Deoxyribonucleoside regulator. | PTS-dependent dihydroxyacetone kinase%2C dihydroxyacetone-binding subunit dhaK. | 0.889 |
deoR_2 | gshAB | ERS852450_03243 | ERS852450_03241 | Deoxyribonucleoside regulator. | Gamma-GCS-GS. | 0.597 |
deoR_2 | lyx | ERS852450_03243 | ERS852450_01903 | Deoxyribonucleoside regulator. | L-xylulose/3-keto-L-gulonate kinase. | 0.429 |
dhaK_1 | deoR_2 | ERS852450_02770 | ERS852450_03243 | PTS-dependent dihydroxyacetone kinase%2C dihydroxyacetone-binding subunit dhaK. | Deoxyribonucleoside regulator. | 0.863 |
dhaK_2 | deoR_2 | ERS852450_03054 | ERS852450_03243 | PTS-dependent dihydroxyacetone kinase%2C dihydroxyacetone-binding subunit dhaK. | Deoxyribonucleoside regulator. | 0.889 |
gshAB | CUP19677.1 | ERS852450_03241 | ERS852450_03242 | Gamma-GCS-GS. | Uncharacterised protein. | 0.773 |
gshAB | deoR_2 | ERS852450_03241 | ERS852450_03243 | Gamma-GCS-GS. | Deoxyribonucleoside regulator. | 0.597 |
lyx | deoR_2 | ERS852450_01903 | ERS852450_03243 | L-xylulose/3-keto-L-gulonate kinase. | Deoxyribonucleoside regulator. | 0.429 |