STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
putP_2Proline permease; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (514 aa)    
Predicted Functional Partners:
ltaS_2
Lipoteichoic acid synthase.
       0.682
CUP20168.1
Sortase (surface protein transpeptidase).
       0.655
cobU
Adenosylcobinamide kinase.
       0.650
sucD
Succinate-semialdehyde dehydrogenase (acetylating).
  
  
 0.568
cstA
Carbon starvation protein A.
  
    0.521
CUN78889.1
Na+/H+ antiporter NhaC.
  
  
 0.438
CUP16660.1
Uncharacterised protein.
  
  
 0.430
CUP20082.1
Protein of uncharacterised function (DUF1189).
       0.429
yajL
Chaperone protein YajL.
       0.421
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.402
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.