Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM70322.1 | rssA | ERS852448_00073 | ERS852448_00166 | Uncharacterised protein. | NTE family protein rssA. | 0.456 |
CUM72201.1 | rssA | ERS852448_00167 | ERS852448_00166 | Predicted ATPase (AAA+ superfamily). | NTE family protein rssA. | 0.561 |
acpP_1 | plsX | ERS852448_00164 | ERS852448_00165 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.781 |
acpP_1 | rssA | ERS852448_00164 | ERS852448_00166 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | NTE family protein rssA. | 0.425 |
plsX | acpP_1 | ERS852448_00165 | ERS852448_00164 | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.781 |
plsX | rssA | ERS852448_00165 | ERS852448_00166 | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | NTE family protein rssA. | 0.455 |
rpfG_3 | rssA | ERS852448_02051 | ERS852448_00166 | Cyclic di-GMP phosphodiesterase response regulator RpfG. | NTE family protein rssA. | 0.617 |
rssA | CUM70322.1 | ERS852448_00166 | ERS852448_00073 | NTE family protein rssA. | Uncharacterised protein. | 0.456 |
rssA | CUM72201.1 | ERS852448_00166 | ERS852448_00167 | NTE family protein rssA. | Predicted ATPase (AAA+ superfamily). | 0.561 |
rssA | acpP_1 | ERS852448_00166 | ERS852448_00164 | NTE family protein rssA. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.425 |
rssA | plsX | ERS852448_00166 | ERS852448_00165 | NTE family protein rssA. | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.455 |
rssA | rpfG_3 | ERS852448_00166 | ERS852448_02051 | NTE family protein rssA. | Cyclic di-GMP phosphodiesterase response regulator RpfG. | 0.617 |