Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM78541.1 | CUM78554.1 | ERS852448_00478 | ERS852448_00479 | Spore coat associated protein JA (CotJA). | CotJB protein. | 0.829 |
CUM78541.1 | CUM78572.1 | ERS852448_00478 | ERS852448_00480 | Spore coat associated protein JA (CotJA). | Manganese catalase. | 0.793 |
CUM78541.1 | CUM80906.1 | ERS852448_00478 | ERS852448_00574 | Spore coat associated protein JA (CotJA). | PD-(D/E)XK nuclease family transposase. | 0.845 |
CUM78541.1 | CUM94242.1 | ERS852448_00478 | ERS852448_01170 | Spore coat associated protein JA (CotJA). | Uncharacterised protein. | 0.927 |
CUM78541.1 | alaS | ERS852448_00478 | ERS852448_01032 | Spore coat associated protein JA (CotJA). | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.903 |
CUM78541.1 | amt | ERS852448_00478 | ERS852448_00204 | Spore coat associated protein JA (CotJA). | Ammonia transporter; Belongs to the P(II) protein family. | 0.775 |
CUM78541.1 | htpG | ERS852448_00478 | ERS852448_00258 | Spore coat associated protein JA (CotJA). | High temperature protein G. | 0.894 |
CUM78541.1 | pgaC | ERS852448_00478 | ERS852448_01448 | Spore coat associated protein JA (CotJA). | Poly-beta-1%2C6-N-acetyl-D-glucosamine synthase. | 0.807 |
CUM78541.1 | rpoA | ERS852448_00478 | ERS852448_01463 | Spore coat associated protein JA (CotJA). | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.851 |
CUM78541.1 | rpoZ | ERS852448_00478 | ERS852448_01298 | Spore coat associated protein JA (CotJA). | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.769 |
CUM78554.1 | CUM78541.1 | ERS852448_00479 | ERS852448_00478 | CotJB protein. | Spore coat associated protein JA (CotJA). | 0.829 |
CUM78554.1 | CUM78572.1 | ERS852448_00479 | ERS852448_00480 | CotJB protein. | Manganese catalase. | 0.979 |
CUM78572.1 | CUM78541.1 | ERS852448_00480 | ERS852448_00478 | Manganese catalase. | Spore coat associated protein JA (CotJA). | 0.793 |
CUM78572.1 | CUM78554.1 | ERS852448_00480 | ERS852448_00479 | Manganese catalase. | CotJB protein. | 0.979 |
CUM80906.1 | CUM78541.1 | ERS852448_00574 | ERS852448_00478 | PD-(D/E)XK nuclease family transposase. | Spore coat associated protein JA (CotJA). | 0.845 |
CUM80906.1 | amt | ERS852448_00574 | ERS852448_00204 | PD-(D/E)XK nuclease family transposase. | Ammonia transporter; Belongs to the P(II) protein family. | 0.639 |
CUM94242.1 | CUM78541.1 | ERS852448_01170 | ERS852448_00478 | Uncharacterised protein. | Spore coat associated protein JA (CotJA). | 0.927 |
CUM94242.1 | alaS | ERS852448_01170 | ERS852448_01032 | Uncharacterised protein. | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.997 |
CUM94242.1 | rpoA | ERS852448_01170 | ERS852448_01463 | Uncharacterised protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
CUM94242.1 | rpoZ | ERS852448_01170 | ERS852448_01298 | Uncharacterised protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.986 |
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