STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM84264.1Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. (372 aa)    
Predicted Functional Partners:
CUN22963.1
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
  0.942
hemZ
Oxygen-independent coproporphyrinogen-III oxidase 2.
  
 
 0.889
cysG
Siroheme synthase.
  
 
 0.860
CUN22943.1
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
  
  0.828
CUM93874.1
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
  
  0.825
hemN
Oxygen-independent coproporphyrinogen-III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
 
 0.788
CUM84367.1
Methylamine methyltransferase corrinoid protein reductive activase.
 
    0.783
CUM84348.1
Predicted metal-binding protein.
  
     0.706
CUN23026.1
Protein of uncharacterised function (DUF1638).
 
     0.664
metH_3
Methionine synthase.
 
 
 0.663
Your Current Organism:
Eubacterium ramulus
NCBI taxonomy Id: 39490
Other names: ATCC 29099, DSM 3995, E. ramulus
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