Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM73621.1 | immR_1 | ERS852448_00249 | ERS852448_00867 | Uncharacterized protein related to capsule biosynthesis enzymes. | HTH-type transcriptional regulator immR. | 0.506 |
CUM92416.1 | immR_1 | ERS852448_01081 | ERS852448_00867 | Uncharacterised protein. | HTH-type transcriptional regulator immR. | 0.420 |
CUM94068.1 | immR_1 | ERS852448_01161 | ERS852448_00867 | Uncharacterised protein. | HTH-type transcriptional regulator immR. | 0.469 |
immR_1 | CUM73621.1 | ERS852448_00867 | ERS852448_00249 | HTH-type transcriptional regulator immR. | Uncharacterized protein related to capsule biosynthesis enzymes. | 0.506 |
immR_1 | CUM92416.1 | ERS852448_00867 | ERS852448_01081 | HTH-type transcriptional regulator immR. | Uncharacterised protein. | 0.420 |
immR_1 | CUM94068.1 | ERS852448_00867 | ERS852448_01161 | HTH-type transcriptional regulator immR. | Uncharacterised protein. | 0.469 |
immR_1 | ttcA_1 | ERS852448_00867 | ERS852448_00866 | HTH-type transcriptional regulator immR. | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | 0.401 |
ttcA_1 | immR_1 | ERS852448_00866 | ERS852448_00867 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | HTH-type transcriptional regulator immR. | 0.401 |