STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM90990.1Stage III sporulation protein AD. (131 aa)    
Predicted Functional Partners:
spoIIIAC
Stage III sporulation protein AC.
 
  
 0.988
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.985
CUM91024.1
Stage III sporulation protein AF.
 
  
 0.984
CUM90929.1
Uncharacterized protein conserved in bacteria.
 
  
 0.931
CUM91043.1
Stage III sporulation protein AG.
 
  
 0.931
CUM90949.1
Stage III sporulation protein SpoAB.
 
  
 0.925
CUM91060.1
SpoIIIAH-like protein.
 
  
 0.892
spoIVA
Stage IV sporulation protein A.
 
    0.883
spo0A
Stage 0 sporulation protein G; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
 
   
 0.809
CUM77460.1
Stage II sporulation protein P.
  
   
 0.807
Your Current Organism:
Eubacterium ramulus
NCBI taxonomy Id: 39490
Other names: ATCC 29099, DSM 3995, E. ramulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.