STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM92068.1Uncharacterised protein. (143 aa)    
Predicted Functional Partners:
CUM92048.1
DNA-binding transcriptional activator of the SARP family.
 
     0.912
CUM92089.1
Uncharacterised protein.
 
     0.866
CUM91961.1
Uncharacterised protein.
 
     0.813
CUM91986.1
Uncharacterised protein.
 
     0.810
CUM92026.1
Uncharacterized protein involved in cytokinesis%2C contains TGc (transglutaminase/protease-like) domain.
 
     0.808
CUM91940.1
Uncharacterised protein.
 
     0.780
CUM91919.1
Uncharacterised protein.
 
     0.761
CUM92129.1
Predicted outer membrane protein.
 
     0.660
epsF
Cholera toxin secretion protein epsF.
 
     0.593
rpfG_3
Cyclic di-GMP phosphodiesterase response regulator RpfG.
  
     0.590
Your Current Organism:
Eubacterium ramulus
NCBI taxonomy Id: 39490
Other names: ATCC 29099, DSM 3995, E. ramulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.