Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM88749.1 | CUN19990.1 | ERS852448_00916 | ERS852448_02353 | Uncharacterised protein. | Acetyltransferase (GNAT) family. | 0.473 |
CUN19978.1 | CUN19990.1 | ERS852448_02352 | ERS852448_02353 | Bifunctional RNase H/acid phosphatase. | Acetyltransferase (GNAT) family. | 0.776 |
CUN19978.1 | CUN20001.1 | ERS852448_02352 | ERS852448_02354 | Bifunctional RNase H/acid phosphatase. | Uncharacterised protein. | 0.402 |
CUN19978.1 | gph_2 | ERS852448_02352 | ERS852448_02351 | Bifunctional RNase H/acid phosphatase. | Phosphoglycolate phosphatase. | 0.494 |
CUN19990.1 | CUM88749.1 | ERS852448_02353 | ERS852448_00916 | Acetyltransferase (GNAT) family. | Uncharacterised protein. | 0.473 |
CUN19990.1 | CUN19978.1 | ERS852448_02353 | ERS852448_02352 | Acetyltransferase (GNAT) family. | Bifunctional RNase H/acid phosphatase. | 0.776 |
CUN19990.1 | CUN20001.1 | ERS852448_02353 | ERS852448_02354 | Acetyltransferase (GNAT) family. | Uncharacterised protein. | 0.402 |
CUN19990.1 | ftsH_1 | ERS852448_02353 | ERS852448_01880 | Acetyltransferase (GNAT) family. | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.474 |
CUN19990.1 | ftsH_2 | ERS852448_02353 | ERS852448_02461 | Acetyltransferase (GNAT) family. | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.474 |
CUN19990.1 | gph_2 | ERS852448_02353 | ERS852448_02351 | Acetyltransferase (GNAT) family. | Phosphoglycolate phosphatase. | 0.476 |
CUN19990.1 | pheA_2 | ERS852448_02353 | ERS852448_02168 | Acetyltransferase (GNAT) family. | P-protein. | 0.643 |
CUN19990.1 | rpoC | ERS852448_02353 | ERS852448_01702 | Acetyltransferase (GNAT) family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.529 |
CUN19990.1 | xynZ | ERS852448_02353 | ERS852448_01664 | Acetyltransferase (GNAT) family. | Endo-1%2C4-beta-xylanase Z precursor. | 0.480 |
CUN20001.1 | CUN19978.1 | ERS852448_02354 | ERS852448_02352 | Uncharacterised protein. | Bifunctional RNase H/acid phosphatase. | 0.402 |
CUN20001.1 | CUN19990.1 | ERS852448_02354 | ERS852448_02353 | Uncharacterised protein. | Acetyltransferase (GNAT) family. | 0.402 |
ftsH_1 | CUN19990.1 | ERS852448_01880 | ERS852448_02353 | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Acetyltransferase (GNAT) family. | 0.474 |
ftsH_2 | CUN19990.1 | ERS852448_02461 | ERS852448_02353 | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Acetyltransferase (GNAT) family. | 0.474 |
gph_2 | CUN19978.1 | ERS852448_02351 | ERS852448_02352 | Phosphoglycolate phosphatase. | Bifunctional RNase H/acid phosphatase. | 0.494 |
gph_2 | CUN19990.1 | ERS852448_02351 | ERS852448_02353 | Phosphoglycolate phosphatase. | Acetyltransferase (GNAT) family. | 0.476 |
gph_2 | pheA_2 | ERS852448_02351 | ERS852448_02168 | Phosphoglycolate phosphatase. | P-protein. | 0.676 |
page 1 of 2