STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctfB_2Butyrate--acetoacetate CoA-transferase subunit B. (225 aa)    
Predicted Functional Partners:
atoD
Acetate CoA-transferase subunit alpha.
 0.999
ctfA
Butyrate--acetoacetate CoA-transferase subunit A.
 0.999
CUN23247.1
Uncharacterized conserved protein.
    
  0.858
thlA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.764
CUN20450.1
Acyl-CoA dehydrogenase%2C short-chain specific.
  
 
 0.669
CUN21978.1
Acyl-CoA dehydrogenase%2C short-chain specific.
  
 
 0.669
buk2_1
Butyrate kinase 2; Belongs to the acetokinase family.
     
 0.650
buk2_2
Butyrate kinase 2; Belongs to the acetokinase family.
     
 0.650
pta_1
Phosphate acetyltransferase.
   
 
 0.645
pta_2
Phosphate acetyltransferase.
   
 
 0.645
Your Current Organism:
Eubacterium ramulus
NCBI taxonomy Id: 39490
Other names: ATCC 29099, DSM 3995, E. ramulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.