STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ80651.1Predicted outer membrane protein. (1103 aa)    
Predicted Functional Partners:
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.923
CUQ82750.1
Sortase (surface protein transpeptidase).
 
   0.825
CUQ80653.1
Uncharacterised protein.
      0.806
CUQ80633.1
Sortase (surface protein transpeptidase).
 
 
   0.789
CUQ80647.1
Protein of uncharacterised function (DUF3852).
       0.773
CUQ80649.1
Uncharacterised protein.
       0.773
CUQ82661.1
Uncharacterised protein.
  
     0.747
CUQ92036.1
Uncharacterised protein.
  
     0.746
CUQ82730.1
DNA primase (bacterial type).
  
     0.672
CUQ82685.1
Uncharacterised protein.
  
     0.666
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.