STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ81653.1ABC transporter%2C substrate-binding protein%2C aliphatic sulfonates family. (382 aa)    
Predicted Functional Partners:
ssuC_1
Putative aliphatic sulfonates transport permease protein ssuC.
 
 
 0.993
CUQ81657.1
Binding-protein-dependent transport system inner membrane component.
 
  
 0.938
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
  
 0.934
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
 
     0.806
tpa
Taurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.802
CUQ81637.1
D-hydantoinase.
 
    0.793
allC
Allantoate amidohydrolase.
 
     0.742
ssuC_2
Putative aliphatic sulfonates transport permease protein ssuC.
 
  
 0.705
ssuB_2
Aliphatic sulfonates import ATP-binding protein SsuB.
 
  
 0.695
CUQ81649.1
Uncharacterized conserved protein.
       0.644
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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