STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yafLProbable endopeptidase YafL precursor. (258 aa)    
Predicted Functional Partners:
pgdS
Gamma-DL-glutamyl hydrolase precursor.
 
  
0.752
yocH
Cell wall-binding protein yocH precursor.
  
  
 0.747
CUQ85132.1
Uncharacterised protein.
  
  
 0.732
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
  
 0.701
CUQ82109.1
Uncharacterised protein.
  
  
 0.614
lyc
Autolytic lysozyme.
  
  
 0.609
CUQ89096.1
Uncharacterized conserved protein.
  
  
 0.605
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
  
  
 0.587
CUQ80574.1
Cpl-7 lysozyme C-terminal domain.
  
  
 0.571
CUQ87681.1
Uncharacterised protein.
  
  
 0.571
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.