STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ83404.1Predicted membrane protein. (259 aa)    
Predicted Functional Partners:
CUQ82982.1
Predicted membrane protein.
  
     0.575
CUQ86322.1
CAAX amino terminal protease self-immunity.
  
    0.531
CUQ86326.1
CAAX prenyl protease-related protein.
  
    0.531
CUQ87725.1
CAAX amino terminal protease self-immunity.
  
    0.531
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.491
CUQ83396.1
Uncharacterised protein.
       0.479
CUQ83400.1
Nucleoside triphosphate pyrophosphohydrolase.
       0.479
CUQ87926.1
Predicted membrane protein.
  
     0.461
CUQ90439.1
Uncharacterised protein.
  
     0.437
CUQ84784.1
Copper exporting ATPase.
  
     0.430
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.