Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUQ84368.1 | CUQ84373.1 | ERS852540_00860 | ERS852540_00861 | Predicted membrane protein. | Domain of uncharacterised function (DUF368). | 0.486 |
CUQ84368.1 | ctpF_1 | ERS852540_00860 | ERS852540_00862 | Predicted membrane protein. | Probable cation-transporting ATPase F. | 0.454 |
CUQ84373.1 | CUQ84368.1 | ERS852540_00861 | ERS852540_00860 | Domain of uncharacterised function (DUF368). | Predicted membrane protein. | 0.486 |
CUQ84373.1 | CUQ84388.1 | ERS852540_00861 | ERS852540_00864 | Domain of uncharacterised function (DUF368). | Uncharacterised protein. | 0.408 |
CUQ84373.1 | ctpF_1 | ERS852540_00861 | ERS852540_00862 | Domain of uncharacterised function (DUF368). | Probable cation-transporting ATPase F. | 0.714 |
CUQ84373.1 | ispF | ERS852540_00861 | ERS852540_01271 | Domain of uncharacterised function (DUF368). | 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.451 |
CUQ84373.1 | polA | ERS852540_00861 | ERS852540_01808 | Domain of uncharacterised function (DUF368). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.449 |
CUQ84388.1 | CUQ84373.1 | ERS852540_00864 | ERS852540_00861 | Uncharacterised protein. | Domain of uncharacterised function (DUF368). | 0.408 |
CUQ84388.1 | ctpF_1 | ERS852540_00864 | ERS852540_00862 | Uncharacterised protein. | Probable cation-transporting ATPase F. | 0.652 |
ctpF_1 | CUQ84368.1 | ERS852540_00862 | ERS852540_00860 | Probable cation-transporting ATPase F. | Predicted membrane protein. | 0.454 |
ctpF_1 | CUQ84373.1 | ERS852540_00862 | ERS852540_00861 | Probable cation-transporting ATPase F. | Domain of uncharacterised function (DUF368). | 0.714 |
ctpF_1 | CUQ84388.1 | ERS852540_00862 | ERS852540_00864 | Probable cation-transporting ATPase F. | Uncharacterised protein. | 0.652 |
ispF | CUQ84373.1 | ERS852540_01271 | ERS852540_00861 | 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | Domain of uncharacterised function (DUF368). | 0.451 |
ispF | polA | ERS852540_01271 | ERS852540_01808 | 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.457 |
polA | CUQ84373.1 | ERS852540_01808 | ERS852540_00861 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Domain of uncharacterised function (DUF368). | 0.449 |
polA | ispF | ERS852540_01808 | ERS852540_01271 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.457 |