STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ84553.1DNA-directed RNA polymerase subunit P. (361 aa)    
Predicted Functional Partners:
CUQ84556.1
Uncharacterised protein.
  
  
 0.945
CUQ83522.1
Putative virion core protein (lumpy skin disease virus).
 
  
 0.859
CUQ84188.1
Putative virion core protein (lumpy skin disease virus).
 
  
 0.825
CUQ80607.1
Sensory histidine kinase UhpB.
  
     0.453
guaB
Inosine-5'-monophosphate dehydrogenase.
 
     0.453
CUQ87734.1
TfoX N-terminal domain.
  
     0.425
copA_2
Copper-exporting P-type ATPase A.
       0.414
CUQ86859.1
Sensory histidine kinase UhpB.
  
     0.407
CUQ90746.1
Uncharacterised protein.
  
  
 0.402
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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