STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ85349.1Uncharacterised protein. (334 aa)    
Predicted Functional Partners:
CUQ85354.1
Domain of uncharacterised function (DUF1963).
       0.782
CUQ85345.1
Uncharacterised protein.
       0.749
CUQ85360.1
Uncharacterised protein.
       0.715
CUQ85341.1
Uncharacterised protein.
       0.713
CUQ85364.1
Uncharacterised protein.
       0.639
CUQ85369.1
Uncharacterised protein.
       0.630
CUQ85373.1
SMI1 / KNR4 family.
       0.630
CUQ85378.1
Uncharacterised protein.
       0.605
CUQ85383.1
Uncharacterized protein conserved in bacteria.
       0.588
CUQ85392.1
Uncharacterised protein.
       0.569
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.