STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC_2Putative aliphatic sulfonates transport permease protein ssuC. (247 aa)    
Predicted Functional Partners:
CUQ88738.1
Putative thiamine biosynthesis protein HI_0357.
 
 0.999
ssuB_2
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 0.999
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
  
 0.956
ssuC_1
Putative aliphatic sulfonates transport permease protein ssuC.
  
  
 
0.924
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
       0.781
thiE
Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.746
CUQ81653.1
ABC transporter%2C substrate-binding protein%2C aliphatic sulfonates family.
 
  
 0.705
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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