Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUQ90690.1 | CUQ90700.1 | ERS852540_02183 | ERS852540_02185 | DUF218 domain. | Chain length determinant protein tyrosine kinase EpsG. | 0.773 |
CUQ90690.1 | CUQ90705.1 | ERS852540_02183 | ERS852540_02186 | DUF218 domain. | Transcriptional regulator PhoU. | 0.432 |
CUQ90690.1 | cheY_2 | ERS852540_02183 | ERS852540_02184 | DUF218 domain. | Chemotaxis protein CheY. | 0.773 |
CUQ90690.1 | dapL | ERS852540_02183 | ERS852540_02182 | DUF218 domain. | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.768 |
CUQ90700.1 | CUQ90690.1 | ERS852540_02185 | ERS852540_02183 | Chain length determinant protein tyrosine kinase EpsG. | DUF218 domain. | 0.773 |
CUQ90700.1 | CUQ90705.1 | ERS852540_02185 | ERS852540_02186 | Chain length determinant protein tyrosine kinase EpsG. | Transcriptional regulator PhoU. | 0.433 |
CUQ90700.1 | cheY_2 | ERS852540_02185 | ERS852540_02184 | Chain length determinant protein tyrosine kinase EpsG. | Chemotaxis protein CheY. | 0.837 |
CUQ90700.1 | dapL | ERS852540_02185 | ERS852540_02182 | Chain length determinant protein tyrosine kinase EpsG. | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.768 |
CUQ90705.1 | CUQ90690.1 | ERS852540_02186 | ERS852540_02183 | Transcriptional regulator PhoU. | DUF218 domain. | 0.432 |
CUQ90705.1 | CUQ90700.1 | ERS852540_02186 | ERS852540_02185 | Transcriptional regulator PhoU. | Chain length determinant protein tyrosine kinase EpsG. | 0.433 |
CUQ90705.1 | cheY_2 | ERS852540_02186 | ERS852540_02184 | Transcriptional regulator PhoU. | Chemotaxis protein CheY. | 0.432 |
CUQ90705.1 | dapL | ERS852540_02186 | ERS852540_02182 | Transcriptional regulator PhoU. | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.438 |
cheY_2 | CUQ90690.1 | ERS852540_02184 | ERS852540_02183 | Chemotaxis protein CheY. | DUF218 domain. | 0.773 |
cheY_2 | CUQ90700.1 | ERS852540_02184 | ERS852540_02185 | Chemotaxis protein CheY. | Chain length determinant protein tyrosine kinase EpsG. | 0.837 |
cheY_2 | CUQ90705.1 | ERS852540_02184 | ERS852540_02186 | Chemotaxis protein CheY. | Transcriptional regulator PhoU. | 0.432 |
cheY_2 | dapL | ERS852540_02184 | ERS852540_02182 | Chemotaxis protein CheY. | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.768 |
dapL | CUQ90690.1 | ERS852540_02182 | ERS852540_02183 | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | DUF218 domain. | 0.768 |
dapL | CUQ90700.1 | ERS852540_02182 | ERS852540_02185 | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | Chain length determinant protein tyrosine kinase EpsG. | 0.768 |
dapL | CUQ90705.1 | ERS852540_02182 | ERS852540_02186 | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | Transcriptional regulator PhoU. | 0.438 |
dapL | cheY_2 | ERS852540_02182 | ERS852540_02184 | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | Chemotaxis protein CheY. | 0.768 |