STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ90964.1Resolvase%2C N terminal domain. (557 aa)    
Predicted Functional Partners:
CUQ90930.1
Antirestriction protein (ArdA).
  
     0.568
CUQ90960.1
Uncharacterised protein.
       0.558
CUQ92907.1
Conjugal transfer coupling protein TraG.
 
 
    0.506
CUQ90956.1
Helix-turn-helix domain.
  
     0.486
CUQ91010.1
Conjugal transfer coupling protein TraG.
 
 
    0.461
CUQ90919.1
Uncharacterised protein.
  
     0.433
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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