STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yecSInner membrane amino-acid ABC transporter permease protein yecS. (219 aa)    
Predicted Functional Partners:
tcyC_2
L-cystine import ATP-binding protein TcyC.
 0.997
fliY_2
Sulfate starvation-induced protein 7.
 
 0.996
tcyB
L-cystine transport system permease protein tcyB.
  
 
0.985
glnH
Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.982
fliY_1
Sulfate starvation-induced protein 7; Belongs to the bacterial solute-binding protein 3 family.
 
 0.980
artM
Arginine transport ATP-binding protein ArtM.
 
 0.902
tcyC_1
L-cystine import ATP-binding protein TcyC.
 
 0.900
cysK1
O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
  
 0.620
znuB
High-affinity zinc uptake system membrane protein znuB.
   
 
 0.583
tcyA
L-cystine-binding protein tcyA precursor.
 
 
 0.565
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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