Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUQ91688.1 | CUQ91692.1 | ERS852540_02379 | ERS852540_02380 | Uncharacterised protein. | Predicted ribosomal protein. | 0.773 |
CUQ91688.1 | CUQ91697.1 | ERS852540_02379 | ERS852540_02381 | Uncharacterised protein. | Uncharacterised protein. | 0.774 |
CUQ91688.1 | CUQ91702.1 | ERS852540_02379 | ERS852540_02382 | Uncharacterised protein. | Phage terminase%2C large subunit%2C PBSX family. | 0.737 |
CUQ91688.1 | CUQ91707.1 | ERS852540_02379 | ERS852540_02383 | Uncharacterised protein. | Uncharacterised protein. | 0.634 |
CUQ91688.1 | rplC | ERS852540_02379 | ERS852540_00441 | Uncharacterised protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.606 |
CUQ91688.1 | rplJ | ERS852540_02379 | ERS852540_01831 | Uncharacterised protein. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.673 |
CUQ91688.1 | rplU | ERS852540_02379 | ERS852540_02572 | Uncharacterised protein. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.777 |
CUQ91688.1 | rpmA | ERS852540_02379 | ERS852540_02574 | Uncharacterised protein. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.924 |
CUQ91688.1 | rpsB | ERS852540_02379 | ERS852540_01178 | Uncharacterised protein. | Vegetative protein 209; Belongs to the universal ribosomal protein uS2 family. | 0.641 |
CUQ91688.1 | rpsG | ERS852540_02379 | ERS852540_00183 | Uncharacterised protein. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.559 |
CUQ91692.1 | CUQ91688.1 | ERS852540_02380 | ERS852540_02379 | Predicted ribosomal protein. | Uncharacterised protein. | 0.773 |
CUQ91692.1 | CUQ91697.1 | ERS852540_02380 | ERS852540_02381 | Predicted ribosomal protein. | Uncharacterised protein. | 0.773 |
CUQ91692.1 | CUQ91702.1 | ERS852540_02380 | ERS852540_02382 | Predicted ribosomal protein. | Phage terminase%2C large subunit%2C PBSX family. | 0.737 |
CUQ91692.1 | CUQ91707.1 | ERS852540_02380 | ERS852540_02383 | Predicted ribosomal protein. | Uncharacterised protein. | 0.634 |
CUQ91697.1 | CUQ91688.1 | ERS852540_02381 | ERS852540_02379 | Uncharacterised protein. | Uncharacterised protein. | 0.774 |
CUQ91697.1 | CUQ91692.1 | ERS852540_02381 | ERS852540_02380 | Uncharacterised protein. | Predicted ribosomal protein. | 0.773 |
CUQ91697.1 | CUQ91702.1 | ERS852540_02381 | ERS852540_02382 | Uncharacterised protein. | Phage terminase%2C large subunit%2C PBSX family. | 0.748 |
CUQ91697.1 | CUQ91707.1 | ERS852540_02381 | ERS852540_02383 | Uncharacterised protein. | Uncharacterised protein. | 0.634 |
CUQ91702.1 | CUQ91688.1 | ERS852540_02382 | ERS852540_02379 | Phage terminase%2C large subunit%2C PBSX family. | Uncharacterised protein. | 0.737 |
CUQ91702.1 | CUQ91692.1 | ERS852540_02382 | ERS852540_02380 | Phage terminase%2C large subunit%2C PBSX family. | Predicted ribosomal protein. | 0.737 |
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