STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycGSensor histidine kinase YycG. (581 aa)    
Predicted Functional Partners:
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein phoP.
 
 0.961
regX3
Sensory transduction protein regX3.
 
 0.888
phoU
Phosphate transport system protein phoU homolog; Plays a role in the regulation of phosphate uptake.
 
   
 0.869
cheR
Chemotaxis protein methyltransferase.
 
    0.863
hssR
Heme response regulator hssR.
 
 0.851
yycF
Transcriptional regulatory protein YycF.
 
 0.847
srrA_1
Staphylococcal respiratory response protein A.
 
 0.838
arlR
Response regulator ArlR.
 
 0.831
pstB3
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
   
 0.829
fixL
Sensor protein fixL.
  
 
 0.784
Your Current Organism:
Eubacterium siraeum
NCBI taxonomy Id: 39492
Other names: ATCC 29066, DSM 15702, DSM 3996, [. siraeum, [Eubacterium] siraeum
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