Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUQ92721.1 | CUQ92729.1 | ERS852540_02583 | ERS852540_02585 | Uncharacterised protein. | Uncharacterised protein. | 0.550 |
CUQ92721.1 | CUQ92732.1 | ERS852540_02583 | ERS852540_02586 | Uncharacterised protein. | Ribonuclease Z. | 0.406 |
CUQ92721.1 | murAB | ERS852540_02583 | ERS852540_02587 | Uncharacterised protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.406 |
CUQ92721.1 | trmB | ERS852540_02583 | ERS852540_02584 | Uncharacterised protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.568 |
CUQ92729.1 | CUQ92721.1 | ERS852540_02585 | ERS852540_02583 | Uncharacterised protein. | Uncharacterised protein. | 0.550 |
CUQ92729.1 | CUQ92732.1 | ERS852540_02585 | ERS852540_02586 | Uncharacterised protein. | Ribonuclease Z. | 0.553 |
CUQ92729.1 | murAB | ERS852540_02585 | ERS852540_02587 | Uncharacterised protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.553 |
CUQ92729.1 | trmB | ERS852540_02585 | ERS852540_02584 | Uncharacterised protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.746 |
CUQ92732.1 | CUQ92721.1 | ERS852540_02586 | ERS852540_02583 | Ribonuclease Z. | Uncharacterised protein. | 0.406 |
CUQ92732.1 | CUQ92729.1 | ERS852540_02586 | ERS852540_02585 | Ribonuclease Z. | Uncharacterised protein. | 0.553 |
CUQ92732.1 | CUQ92740.1 | ERS852540_02586 | ERS852540_02588 | Ribonuclease Z. | Uncharacterised protein. | 0.420 |
CUQ92732.1 | htrA | ERS852540_02586 | ERS852540_01042 | Ribonuclease Z. | Serine protease Do-like HtrA. | 0.428 |
CUQ92732.1 | murAB | ERS852540_02586 | ERS852540_02587 | Ribonuclease Z. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.794 |
CUQ92732.1 | polA | ERS852540_02586 | ERS852540_01808 | Ribonuclease Z. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.406 |
CUQ92732.1 | purL | ERS852540_02586 | ERS852540_00593 | Ribonuclease Z. | Phosphoribosylformylglycinamidine synthase 2. | 0.461 |
CUQ92732.1 | rlmH | ERS852540_02586 | ERS852540_01310 | Ribonuclease Z. | Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.424 |
CUQ92732.1 | trmB | ERS852540_02586 | ERS852540_02584 | Ribonuclease Z. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.557 |
CUQ92740.1 | CUQ92732.1 | ERS852540_02588 | ERS852540_02586 | Uncharacterised protein. | Ribonuclease Z. | 0.420 |
CUQ92740.1 | murAB | ERS852540_02588 | ERS852540_02587 | Uncharacterised protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.420 |
htrA | CUQ92732.1 | ERS852540_01042 | ERS852540_02586 | Serine protease Do-like HtrA. | Ribonuclease Z. | 0.428 |
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