Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0T39_05975 | B0T39_11725 | GCA_000758475_01884 | GCA_000758475_02751 | Unannotated protein. | Unannotated protein. | 0.677 |
B0T39_05975 | GCA_000758475_01717 | GCA_000758475_01884 | GCA_000758475_01717 | Unannotated protein. | Unannotated protein. | 0.409 |
B0T39_05975 | PslB | GCA_000758475_01884 | GCA_000758475_02988 | Unannotated protein. | Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.457 |
B0T39_05975 | RfbC | GCA_000758475_01884 | GCA_000758475_00273 | Unannotated protein. | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.817 |
B0T39_05975 | RmlA | GCA_000758475_01884 | GCA_000758475_00274 | Unannotated protein. | Unannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.810 |
B0T39_05975 | RmlD | GCA_000758475_01884 | GCA_000758475_00275 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.519 |
B0T39_10725 | B0T39_11725 | GCA_000758475_04472 | GCA_000758475_02751 | Unannotated protein. | Unannotated protein. | 0.418 |
B0T39_10725 | GCA_000758475_01715 | GCA_000758475_04472 | GCA_000758475_01715 | Unannotated protein. | Unannotated protein. | 0.717 |
B0T39_10725 | GCA_000758475_01717 | GCA_000758475_04472 | GCA_000758475_01717 | Unannotated protein. | Unannotated protein. | 0.966 |
B0T39_10725 | PslB | GCA_000758475_04472 | GCA_000758475_02988 | Unannotated protein. | Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.548 |
B0T39_10725 | RfbC | GCA_000758475_04472 | GCA_000758475_00273 | Unannotated protein. | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.913 |
B0T39_10725 | RkpK | GCA_000758475_04472 | GCA_000758475_00820 | Unannotated protein. | Unannotated protein. | 0.923 |
B0T39_10725 | RmlA | GCA_000758475_04472 | GCA_000758475_00274 | Unannotated protein. | Unannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.913 |
B0T39_10725 | RmlB | GCA_000758475_04472 | GCA_000758475_00276 | Unannotated protein. | Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.918 |
B0T39_10725 | RmlD | GCA_000758475_04472 | GCA_000758475_00275 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.537 |
B0T39_11725 | B0T39_05975 | GCA_000758475_02751 | GCA_000758475_01884 | Unannotated protein. | Unannotated protein. | 0.677 |
B0T39_11725 | B0T39_10725 | GCA_000758475_02751 | GCA_000758475_04472 | Unannotated protein. | Unannotated protein. | 0.418 |
B0T39_11725 | GCA_000758475_01715 | GCA_000758475_02751 | GCA_000758475_01715 | Unannotated protein. | Unannotated protein. | 0.585 |
B0T39_11725 | GCA_000758475_01717 | GCA_000758475_02751 | GCA_000758475_01717 | Unannotated protein. | Unannotated protein. | 0.944 |
B0T39_11725 | PslB | GCA_000758475_02751 | GCA_000758475_02988 | Unannotated protein. | Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.778 |
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