STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0T39_21050Unannotated protein. (531 aa)    
Predicted Functional Partners:
B0T39_06435
Unannotated protein.
 0.977
DppC
Unannotated protein.
 0.975
dppD
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 
 0.958
DppF
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 0.956
oppB
Unannotated protein.
 
 0.715
GsiC
Unannotated protein.
 
 0.645
GsiC-2
Unannotated protein.
 
 0.626
OppC
Unannotated protein.
 
 0.608
OppA
Unannotated protein.
 
 
0.567
AppC
Unannotated protein.
 
 0.532
Your Current Organism:
Chromobacterium haemolyticum
NCBI taxonomy Id: 394935
Other names: C. haemolyticum, CCUG 53230, Chromobacterium haemolyticum Han et al. 2008, DSM 19808, JCM 14163, strain MDA0585
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.