STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0T39_20030Unannotated protein. (503 aa)    
Predicted Functional Partners:
B0T39_20035
Unannotated protein.
 
 0.991
B0T39_04510
Unannotated protein.
 
 0.979
B0T39_16735
Unannotated protein.
 
 0.977
GCA_000758475_04018
Unannotated protein.
 
 
 0.972
B0T39_20040
Unannotated protein.
 
  
 0.959
B0T39_20025
Unannotated protein.
 
 
 0.955
B0T39_04500
Unannotated protein.
 
 
 0.922
B0T39_16745
Unannotated protein.
 
 
 0.922
B0T39_20015
Unannotated protein.
 
  
 0.915
B0T39_20010
Unannotated protein.
 
  
 0.894
Your Current Organism:
Chromobacterium haemolyticum
NCBI taxonomy Id: 394935
Other names: C. haemolyticum, CCUG 53230, Chromobacterium haemolyticum Han et al. 2008, DSM 19808, JCM 14163, strain MDA0585
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.