Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0T39_00510 | B0T39_12940 | GCA_000758475_03203 | GCA_000758475_01624 | Unannotated protein. | Unannotated protein. | 0.921 |
B0T39_12930 | B0T39_12935 | GCA_000758475_01622 | GCA_000758475_01623 | Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | Unannotated protein. | 0.545 |
B0T39_12930 | B0T39_12940 | GCA_000758475_01622 | GCA_000758475_01624 | Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | Unannotated protein. | 0.545 |
B0T39_12930 | B0T39_12945 | GCA_000758475_01622 | GCA_000758475_01625 | Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | Unannotated protein. | 0.538 |
B0T39_12930 | ubiA | GCA_000758475_01622 | GCA_000758475_01621 | Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.988 |
B0T39_12935 | B0T39_12930 | GCA_000758475_01623 | GCA_000758475_01622 | Unannotated protein. | Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.545 |
B0T39_12935 | B0T39_12940 | GCA_000758475_01623 | GCA_000758475_01624 | Unannotated protein. | Unannotated protein. | 0.993 |
B0T39_12935 | B0T39_12945 | GCA_000758475_01623 | GCA_000758475_01625 | Unannotated protein. | Unannotated protein. | 0.545 |
B0T39_12935 | ubiA | GCA_000758475_01623 | GCA_000758475_01621 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.548 |
B0T39_12940 | B0T39_00510 | GCA_000758475_01624 | GCA_000758475_03203 | Unannotated protein. | Unannotated protein. | 0.921 |
B0T39_12940 | B0T39_12930 | GCA_000758475_01624 | GCA_000758475_01622 | Unannotated protein. | Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.545 |
B0T39_12940 | B0T39_12935 | GCA_000758475_01624 | GCA_000758475_01623 | Unannotated protein. | Unannotated protein. | 0.993 |
B0T39_12940 | B0T39_12945 | GCA_000758475_01624 | GCA_000758475_01625 | Unannotated protein. | Unannotated protein. | 0.545 |
B0T39_12940 | ubiA | GCA_000758475_01624 | GCA_000758475_01621 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.548 |
B0T39_12945 | B0T39_12930 | GCA_000758475_01625 | GCA_000758475_01622 | Unannotated protein. | Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.538 |
B0T39_12945 | B0T39_12935 | GCA_000758475_01625 | GCA_000758475_01623 | Unannotated protein. | Unannotated protein. | 0.545 |
B0T39_12945 | B0T39_12940 | GCA_000758475_01625 | GCA_000758475_01624 | Unannotated protein. | Unannotated protein. | 0.545 |
B0T39_12945 | ubiA | GCA_000758475_01625 | GCA_000758475_01621 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.432 |
ubiA | B0T39_12930 | GCA_000758475_01621 | GCA_000758475_01622 | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.988 |
ubiA | B0T39_12935 | GCA_000758475_01621 | GCA_000758475_01623 | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | Unannotated protein. | 0.548 |
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