STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000758475_01791Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000758475_01792
Unannotated protein.
       0.773
GCA_000758475_01787
Unannotated protein.
       0.763
GCA_000758475_01789
Unannotated protein.
       0.763
GCA_000758475_01790
Unannotated protein.
       0.759
GCA_000758475_01788
Unannotated protein.
       0.758
GCA_000758475_01793
Unannotated protein.
 
     0.681
B0T39_20605
Unannotated protein.
 
     0.681
GCA_000758475_01794
Unannotated protein.
       0.665
GCA_000758475_01795
Unannotated protein.
       0.665
B0T39_02170
Unannotated protein.
 
   
 0.647
Your Current Organism:
Chromobacterium haemolyticum
NCBI taxonomy Id: 394935
Other names: C. haemolyticum, CCUG 53230, Chromobacterium haemolyticum Han et al. 2008, DSM 19808, JCM 14163, strain MDA0585
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.