STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0T39_01835Unannotated protein. (162 aa)    
Predicted Functional Partners:
B0T39_01840
Unannotated protein.
 
 
 0.999
SigE
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.983
B0T39_01850
Unannotated protein; Belongs to the peptidase S1C family.
  
 
 0.948
B0T39_03975
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.908
B0T39_05385
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.896
FecI
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.896
B0T39_24115
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.879
GCA_000758475_00078
Unannotated protein.
 
 
 0.867
HtrA
Unannotated protein; Belongs to the peptidase S1C family.
  
 
 0.843
B0T39_22095
Unannotated protein.
   
    0.805
Your Current Organism:
Chromobacterium haemolyticum
NCBI taxonomy Id: 394935
Other names: C. haemolyticum, CCUG 53230, Chromobacterium haemolyticum Han et al. 2008, DSM 19808, JCM 14163, strain MDA0585
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.