STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0T39_01945Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (360 aa)    
Predicted Functional Partners:
B0T39_01950
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
B0T39_01940
Unannotated protein.
 
 
 0.998
B0T39_01935
Unannotated protein.
 
 
 0.986
B0T39_12500
Unannotated protein.
 
 
 0.976
B0T39_08620
Unannotated protein.
 
     0.585
rbsA
Unannotated protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
     0.509
B0T39_01955
Unannotated protein.
       0.418
B0T39_01960
Unannotated protein; Belongs to the UPF0312 family.
       0.418
B0T39_01965
Unannotated protein; Belongs to the UPF0312 family.
       0.418
B0T39_12795
Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.409
Your Current Organism:
Chromobacterium haemolyticum
NCBI taxonomy Id: 394935
Other names: C. haemolyticum, CCUG 53230, Chromobacterium haemolyticum Han et al. 2008, DSM 19808, JCM 14163, strain MDA0585
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.