Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AarA | B0T39_19680 | GCA_000758475_04006 | GCA_000758475_02948 | Unannotated protein. | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.693 |
B0T39_05925 | B0T39_19680 | GCA_000758475_01894 | GCA_000758475_02948 | Unannotated protein. | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.693 |
B0T39_19675 | B0T39_19680 | GCA_000758475_02947 | GCA_000758475_02948 | Unannotated protein. | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.781 |
B0T39_19675 | B0T39_19690 | GCA_000758475_02947 | GCA_000758475_02949 | Unannotated protein. | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.432 |
B0T39_19675 | B0T39_19710 | GCA_000758475_02947 | GCA_000758475_02953 | Unannotated protein. | Unannotated protein. | 0.405 |
B0T39_19680 | AarA | GCA_000758475_02948 | GCA_000758475_04006 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein. | 0.693 |
B0T39_19680 | B0T39_05925 | GCA_000758475_02948 | GCA_000758475_01894 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein. | 0.693 |
B0T39_19680 | B0T39_19675 | GCA_000758475_02948 | GCA_000758475_02947 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein. | 0.781 |
B0T39_19680 | B0T39_19690 | GCA_000758475_02948 | GCA_000758475_02949 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.592 |
B0T39_19680 | B0T39_19710 | GCA_000758475_02948 | GCA_000758475_02953 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein. | 0.473 |
B0T39_19680 | folD | GCA_000758475_02948 | GCA_000758475_03980 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.948 |
B0T39_19680 | glyQ | GCA_000758475_02948 | GCA_000758475_02396 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein. | 0.483 |
B0T39_19680 | pheT | GCA_000758475_02948 | GCA_000758475_02104 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.582 |
B0T39_19680 | purN | GCA_000758475_02948 | GCA_000758475_02491 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.938 |
B0T39_19680 | purT | GCA_000758475_02948 | GCA_000758475_03261 | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Unannotated protein; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.910 |
B0T39_19690 | B0T39_19675 | GCA_000758475_02949 | GCA_000758475_02947 | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | Unannotated protein. | 0.432 |
B0T39_19690 | B0T39_19680 | GCA_000758475_02949 | GCA_000758475_02948 | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.592 |
B0T39_19690 | B0T39_19710 | GCA_000758475_02949 | GCA_000758475_02953 | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | Unannotated protein. | 0.746 |
B0T39_19710 | B0T39_19675 | GCA_000758475_02953 | GCA_000758475_02947 | Unannotated protein. | Unannotated protein. | 0.405 |
B0T39_19710 | B0T39_19680 | GCA_000758475_02953 | GCA_000758475_02948 | Unannotated protein. | Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.473 |
page 1 of 2