STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0T39_00575Unannotated protein. (139 aa)    
Predicted Functional Partners:
B0T39_11920
Unannotated protein.
   
    0.805
B0T39_00585
Unannotated protein.
       0.797
B0T39_00580
Unannotated protein.
       0.797
B0T39_17910
Unannotated protein; Belongs to the WrbA family.
   
  
 0.777
B0T39_23665
Unannotated protein.
   
  
 0.777
BplH
Unannotated protein.
  
   
 0.731
B0T39_14920
Unannotated protein.
  
     0.724
B0T39_19870
Unannotated protein.
  
     0.705
B0T39_14535
Unannotated protein.
  
     0.662
B0T39_15540
Unannotated protein.
  
     0.660
Your Current Organism:
Chromobacterium haemolyticum
NCBI taxonomy Id: 394935
Other names: C. haemolyticum, CCUG 53230, Chromobacterium haemolyticum Han et al. 2008, DSM 19808, JCM 14163, strain MDA0585
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.