Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0T39_13475 | GCA_000758475_03055 | GCA_000758475_00064 | GCA_000758475_03055 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.905 |
B0T39_13475 | NadC | GCA_000758475_00064 | GCA_000758475_02089 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein; Belongs to the NadC/ModD family. | 0.900 |
B0T39_13475 | nadD | GCA_000758475_00064 | GCA_000758475_00251 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.900 |
B0T39_13475 | nudC | GCA_000758475_00064 | GCA_000758475_03564 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.908 |
B0T39_13475 | pncB | GCA_000758475_00064 | GCA_000758475_02309 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.903 |
B0T39_13475 | surE | GCA_000758475_00064 | GCA_000758475_03248 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.917 |
B0T39_13475 | ushA | GCA_000758475_00064 | GCA_000758475_02031 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.926 |
GCA_000758475_03055 | B0T39_13475 | GCA_000758475_03055 | GCA_000758475_00064 | Unannotated protein. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.905 |
GCA_000758475_03055 | NadC | GCA_000758475_03055 | GCA_000758475_02089 | Unannotated protein. | Unannotated protein; Belongs to the NadC/ModD family. | 0.424 |
GCA_000758475_03055 | cobB | GCA_000758475_03055 | GCA_000758475_00033 | Unannotated protein. | Unannotated protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | 0.933 |
GCA_000758475_03055 | nadD | GCA_000758475_03055 | GCA_000758475_00251 | Unannotated protein. | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.927 |
GCA_000758475_03055 | nadE | GCA_000758475_03055 | GCA_000758475_02024 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.714 |
GCA_000758475_03055 | nudC | GCA_000758475_03055 | GCA_000758475_03564 | Unannotated protein. | Unannotated protein; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.925 |
GCA_000758475_03055 | surE | GCA_000758475_03055 | GCA_000758475_03248 | Unannotated protein. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.902 |
GCA_000758475_03055 | ushA | GCA_000758475_03055 | GCA_000758475_02031 | Unannotated protein. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.905 |
NadC | B0T39_13475 | GCA_000758475_02089 | GCA_000758475_00064 | Unannotated protein; Belongs to the NadC/ModD family. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.900 |
NadC | GCA_000758475_03055 | GCA_000758475_02089 | GCA_000758475_03055 | Unannotated protein; Belongs to the NadC/ModD family. | Unannotated protein. | 0.424 |
NadC | nadD | GCA_000758475_02089 | GCA_000758475_00251 | Unannotated protein; Belongs to the NadC/ModD family. | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.938 |
NadC | nadE | GCA_000758475_02089 | GCA_000758475_02024 | Unannotated protein; Belongs to the NadC/ModD family. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.560 |
NadC | nudC | GCA_000758475_02089 | GCA_000758475_03564 | Unannotated protein; Belongs to the NadC/ModD family. | Unannotated protein; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.903 |
page 1 of 4