Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B0T39_01670 | HupB | GCA_000758475_02584 | GCA_000758475_03823 | Unannotated protein. | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.610 |
| B0T39_01670 | ihfA | GCA_000758475_02584 | GCA_000758475_02103 | Unannotated protein. | Unannotated protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.466 |
| B0T39_01670 | lon | GCA_000758475_02584 | GCA_000758475_03822 | Unannotated protein. | Unannotated protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.486 |
| B0T39_01670 | rplS | GCA_000758475_02584 | GCA_000758475_03241 | Unannotated protein. | Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.908 |
| HupB | B0T39_01670 | GCA_000758475_03823 | GCA_000758475_02584 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein. | 0.610 |
| HupB | acpP | GCA_000758475_03823 | GCA_000758475_02300 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.568 |
| HupB | clpX | GCA_000758475_03823 | GCA_000758475_03821 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.551 |
| HupB | dnaA | GCA_000758475_03823 | GCA_000758475_03089 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.670 |
| HupB | ihfA | GCA_000758475_03823 | GCA_000758475_02103 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.711 |
| HupB | lon | GCA_000758475_03823 | GCA_000758475_03822 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.599 |
| HupB | rplL | GCA_000758475_03823 | GCA_000758475_04560 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.599 |
| HupB | rplS | GCA_000758475_03823 | GCA_000758475_03241 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.528 |
| HupB | rpsO | GCA_000758475_03823 | GCA_000758475_02208 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.625 |
| HupB | rpsT | GCA_000758475_03823 | GCA_000758475_03320 | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Unannotated protein; Binds directly to 16S ribosomal RNA. | 0.662 |
| acpP | HupB | GCA_000758475_02300 | GCA_000758475_03823 | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.568 |
| acpP | ihfA | GCA_000758475_02300 | GCA_000758475_02103 | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Unannotated protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.842 |
| acpP | rplL | GCA_000758475_02300 | GCA_000758475_04560 | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.891 |
| acpP | rplS | GCA_000758475_02300 | GCA_000758475_03241 | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.748 |
| acpP | rpsT | GCA_000758475_02300 | GCA_000758475_03320 | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Unannotated protein; Binds directly to 16S ribosomal RNA. | 0.485 |
| clpX | HupB | GCA_000758475_03821 | GCA_000758475_03823 | Unannotated protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.551 |
page 1 of 4