STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA63308.1Protein of unknown function. (338 aa)    
Predicted Functional Partners:
SKA67341.1
Signal transduction histidine kinase.
     
 0.705
SKA69044.1
Two component transcriptional regulator, LuxR family.
   
 0.540
SKA70721.1
Two component transcriptional regulator, LuxR family.
   
 0.540
SKA72076.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
   
 0.540
SKA70265.1
Cell wall-active antibiotics response 4TMS YvqF.
  
    0.503
SKA63313.1
Hypothetical protein.
       0.486
SKA63320.1
Alpha-galactosidase.
       0.447
clpB
ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
       0.432
Your Current Organism:
Eubacterium uniforme
NCBI taxonomy Id: 39495
Other names: ATCC 35992, E. uniforme, strain X3C39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.