STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA66315.1Competence protein ComEC. (764 aa)    
Predicted Functional Partners:
SKA66301.1
Competence protein ComEA.
 
  
 0.883
SKA66311.1
Germination protein M.
 
     0.838
SKA66308.1
Signal transduction histidine kinase.
 
    0.817
SKA66320.1
DNA polymerase III, delta subunit.
 
   
 0.791
SKA66305.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
    0.776
SKA66493.1
DNA processing protein.
 
  
 0.736
SKA63989.1
comF family protein.
 
  
 0.712
SKA60161.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
     
 0.523
SKA66296.1
Maltose-binding protein MalE.
       0.499
SKA66323.1
Hypothetical protein.
       0.475
Your Current Organism:
Eubacterium uniforme
NCBI taxonomy Id: 39495
Other names: ATCC 35992, E. uniforme, strain X3C39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.