STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA69098.1Serine protease, subtilisin family. (1013 aa)    
Predicted Functional Partners:
SKA72486.1
Chitobiase/beta-hexosaminidase C-terminal domain-containing protein.
  
 0.717
SKA69096.1
Stress responsive A/B Barrel Domain.
       0.592
SKA69095.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
       0.496
SKA69093.1
Hypothetical protein.
     
 0.470
SKA59972.1
Leucine rich repeat-containing protein.
   
  0.446
SKA60327.1
Protein of unknown function.
   
  0.446
SKA61435.1
LPXTG-motif cell wall anchor domain-containing protein/choice-of-anchor A domain-containing protein.
   
  0.446
SKA61735.1
Hypothetical protein.
   
  0.446
SKA68111.1
alpha-L-fucosidase 2.
   
  0.446
SKA69125.1
L,D-transpeptidase catalytic domain.
   
  0.446
Your Current Organism:
Eubacterium uniforme
NCBI taxonomy Id: 39495
Other names: ATCC 35992, E. uniforme, strain X3C39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.